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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885587.1_cds_XP_016439619.1_35159
CDS Infomation

[gene=LOC107765479] [db_xref=GeneID:107765479] [protein=tyrosine--tRNA ligase 1, cytoplasmic-like] [protein_id=XP_016439619.1] [location=join(121662..121744,121825..121911,122260..122407,122950..123239,123327..123423,124379..124484,124584..124666,124832..124977,125076..125181,125733..125792,126750..126770)] [gbkey=CDS]
Sequence

ATGGATAACAAAGAAGCTTCAGAAGCCATTAATGCACTCTCCTCACCGCCTTCTTCAGCT
GACACTCCTATTTCCACATCTCAGAATATGGATAATCAAGAGACTTCAGAAGCCATTGAT
GCACTCTCATTGGCAGCTTCCTCATCCAACCCTTCCATTTCAACTTCGCAGATGAGCTTG
GAGGAGAAGTTCAAGATTGTTAGGAGTATTGGCGAGGAATGCATACAGGAGGATGAGTTG
ATGAATCTTTTGGCAAAGAAGCCACAACCGGTTTGCTATGATGGTTTTGAGCCTTCTGGT
CGAATGCACATTGCTCAGGGAGTTTTGAAGGCACTAAACGTCAACAAACTGACTTCGGCT
GGCTGCAAGGTGAAGATCTGGATTGCAGATTGGTTTGCGCAGCTAAATAACAAGATGGGT
GGTGATCTGAAGAAAATTGAGGTTGTTGGTCAGTATTTGATTGAGATATGGAAGGCTGTG
GGAATGAATCTTGAAGGGGGTCATGTGGAATTTCTATGGTCTTCAAAAGAGATTAACTCT
AGAGCTCATGAGTACTGGCCACTTGTTATGGACGTAGCTCGAAGGAACAAGCTTCCCCGG
ATTTTAAGGTGCTGCCAAATTATGGGTCGGTCTGAGCAAGATGAGTTGACAGCGGCCCAG
ATTTTTTACCCATGCATGCAATGTGCTGACATATTCTTCCTTAAGGCTGACATATGTCAA
CTAGGTATGGACCAGCGAAAGGTTAATGTACTTGCAAGAGAGTACTGTGATGACATCAGG
AGGAAAAACAAGCCTATCATATTGTCCCATCATATGCTCCCTGGTTTGCAGGAAGGTCAA
GAGAAGATGTCCAAGAGTGACCCCTCTTCTTCCATCTACATGGAGGATGAAGAGGCAGAT
GTAAATCTCAAGATAAAGAAGGCTTTTTGTCCACCAAAGGTCGTAGAAAAGAATCCATGT
CTGGAGTACATCAAGTATATCGTCCTCCCTTGGTTTAATGAGTTCAAAATTGAGCGAAGT
GCTGAGAATGGTGCGGACAAGACCTATAAGAATTTTGAAGAATTAGCGGCTGACTATGAA
AGTGGGAACTTGCATCCTGCAGATCTGAAACCTGCATTGTCAAAAGCAATCAATAAGATA
TTACAGCCAGTGCGTGATCATTTTAAGAATGATCAGAAAGCCAAAGACCTTATGAAAAGG
GTGAAGAGTTTCAAAGTAACGAGGTGA

Peptide Sequence

PEP ID

XP_016439619.1
PEP Infomation

PREDICTED: tyrosine--tRNA ligase 1, cytoplasmic-like [Nicotiana tabacum]
Sequence

MDNKEASEAINALSSPPSSADTPISTSQNMDNQETSEAIDALSLAASSSNPSISTSQMSL
EEKFKIVRSIGEECIQEDELMNLLAKKPQPVCYDGFEPSGRMHIAQGVLKALNVNKLTSA
GCKVKIWIADWFAQLNNKMGGDLKKIEVVGQYLIEIWKAVGMNLEGGHVEFLWSSKEINS
RAHEYWPLVMDVARRNKLPRILRCCQIMGRSEQDELTAAQIFYPCMQCADIFFLKADICQ
LGMDQRKVNVLAREYCDDIRRKNKPIILSHHMLPGLQEGQEKMSKSDPSSSIYMEDEEAD
VNLKIKKAFCPPKVVEKNPCLEYIKYIVLPWFNEFKIERSAENGADKTYKNFEELAADYE
SGNLHPADLKPALSKAINKILQPVRDHFKNDQKAKDLMKRVKSFKVTR

Transcript Sequence

Gene sequence data has not been registered.